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Migrating a medical & healthcare supplies store from WooCommerce to Shopify (2026)

How to migrate a medical supplies, healthcare, or wellness products WooCommerce store to Shopify — regulatory compliance, CE/FDA marking, prescription vs OTC, professional pricing, and payment processor eligibility.

·By k-sync
5 min read · 1,016 words

Medical supplies and healthcare product stores range from professional clinical equipment distributors to consumer wellness retailers. All face heightened regulatory requirements for product data accuracy, claims compliance, and payment processing. Here's how to navigate this migration carefully.

Healthcare ecommerce categories (and complexity level)

Regulatory compliance metafields

EU/UK medical device classification

US FDA classification

Product identification codes

VAT and tax classification (UK/EU)

Prescription vs over-the-counter products

This is a critical distinction that affects what you can legally sell online:

Over-the-counter (OTC): standard ecommerce

Prescription products: NOT standard ecommerce

Shopify Payments eligibility for medical products

Healthcare and medical products have specific Shopify Payments restrictions:

Professional customer pricing (B2B healthcare)

Many medical supply companies serve both retail consumers and healthcare professionals at different prices:

Compliance content on product pages

Medical product pages legally require specific content:

Delivery restrictions for medical products

Medical store migration checklist

Healthcare ecommerce is one of the few categories where the migration itself should trigger a regulatory review, not just a technical review. If your WooCommerce store accumulated medical claims content over years of blog posts and product descriptions, migrating is the opportunity to audit those claims against current UK/EU/US advertising standards. MHRA's enforcement of medical device advertising has increased significantly — product description text that made it past WooCommerce without issue may attract regulatory attention on a freshly-relaunched, higher-visibility Shopify storefront.

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